[DFTB-Plus-User] Ammonium formate
Ruggero Gabbrielli
ruggero.gabbrielli at unitn.it
Mon Jun 19 17:00:52 CEST 2023
Hi,
I am trying to thermalise a simple system containing one formic acid
molecule and one ammonia molecule. I would expect a proton to move from
formic acid to ammonia but this does not happen.
Do you possibly know what I am doing wrong?
Thank you.
Driver = VelocityVerlet{
# Time step for MD
TimeStep [fs] = 1.0
# Use thermostat to maintain temperature
Thermostat = NoseHoover {
Temperature [Kelvin] = 310
# Approximately the highest vibrational frequency of the molecule
CouplingStrength [cm^-1] = 3200
}
# total of 10 ps
Steps = 10000
MovedAtoms = 1:-1
# save every 100 steps
MDRestartFrequency = 100
}
Hamiltonian = DFTB {
SCC = Yes
MaxSCCIterations = 1000
Filling = Fermi {
Temperature [Kelvin] = 310
}
SlaterKosterFiles = Type2FileNames {
Prefix = "../../../slakos/mio-ext/"
Separator = "-"
Suffix = ".skf"
}
MaxAngularMomentum = {
H = "s"
O = "p"
C = "p"
N = "p"
}
}
--
Ruggero Gabbrielli, PhD
Research Fellow
Laboratory for Bioinspired, Bionic, Nano, Meta Materials & Mechanics
Department of Civil, Environmental and Mechanical Engineering
University of Trento
via Mesiano 77
38123 Trento, Italy
+39 0461 282597
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