[DFTB-Plus-User] DFTB+-MPI=NEGF-R4732 compilation error - SCALAPACK
Anshu Gaur
agaur at iitk.ac.in
Tue Aug 22 20:19:50 CEST 2017
Dear Sir/Madam,
Is there a recommended version of scalapack to be used while compiling
dftb+-mpi-negf code? I'm using scalapack-2.0.2 from netlib. Clearly
there is some issue withfunctions defined in 'libscalapack.a'. How do I
overcome this.
Regards,
----------------------------------------------------------------
mpif90 -openmp -o dftb+ main.o mpiglobal.o mpifx_extlib.o dftb+.o
shift.o accuracy.o common_types.o allocate.o geoopt.o conjgrad.o
linmin.o constants.o stepdesc.o mainio.o sparse2dense.o memman.o
periodic.o sort.o message.o bisection.o linkedlist.o simple_algebra.o
fileid.o blasroutines.o blas.o fifo.o charmanip.o initprogram.o
libnegf_vars.o wrapped_intrinsics.o disp_uff.o disp_common.o
error_function.o inputconversion.o diis_mixer.o lapackroutines.o
lapack.o scc.o coulomb.o scalapackfx_extlib.o timer.o extcharge.o
charge_constraints.o short_gamma.o dummy_thermostat.o md_common.o
ranlux.o slako_cont.o slako_eq_grid.o interpolation.o orbital_equiv.o
nhc_thermostat.o energies.o temp_profile.o simple_mixer.o
numericalDerivs.o thermostat.o berendsen_thermostat.o
andersen_thermostat.o spin.o disp_slaterkirkwood.o poisson_int.o
inputdata_.o rep_cont.o rep_poly.o rep_spline.o dispersion.o
poisson_vars.o gprecision.o type_geometry.o structure.o gallocation.o
mpi_poisson.o parameters.o gconstants.o parcheck.o poisson.o gewald.o
gclock.o bulkpot.o fancybc.o broyden_mixer.o thirdorder.o parallel.o
etemp.o hermite.o fact.o md_integrator.o velocity_verlet.o intrinsicpr.o
negf_int.o mat_conv.o mixer_adt.o anderson_mixer.o scc_init.o
dftb_pls_u.o eigensolver.o nonscc.o sk.o populations.o constraints.o
angmomentum.o qm.o potentials.o formatout.o xmlf90.o eigenvects.o
parser.o stringlist.o hsdutils2.o hsdparser.o xmlutils.o hsdutils.o
tokenreader.o unitconversion.o disp_uff_data.o general_list.o
oldcompat.o wrapped_pointers.o type_geometry_hsd.o old_sk_data.o
stressTensor.o taggedout.o densitymatrix.o repulsive.o spinorbit.o
forces.o
-L/home/anshu/Sim-Software/DFTB/src/prg_dftb/../../extlib/libnegf -lnegf
-L/home/anshu/Sim-Software/DFTB/src/prg_dftb/../../extlib/sparskit
-lzsparskit
-L/home/anshu/Sim-Software/DFTB/src/prg_dftb/../../extlib/mudpack
-lmudpack
-L/home/anshu/Sim-Software/DFTB/src/prg_dftb/../../extlib/xmlf90
-lxmlf90
-L/home/anshu/Sim-Software/DFTB/src/prg_dftb/../../extlib/scalapackfx/src
-lscalapackfx
-L/home/anshu/Sim-Software/DFTB/src/prg_dftb/../../extlib/mpifx/src
-lmpifx -L/home/anshu/Sim-Software/scalapack_installer/install/lib -ltmg
-lreflapack -L/home/anshu/Sim-Software/scalapack_installer/install/lib
-lrefblas -L/home/anshu/Sim-Software/scalapack_installer/install/lib
-lscalapack
/home/anshu/Sim-Software/scalapack_installer/install/lib/libscalapack.a(PB_Cctypeset.o):
In function `PB_Cctypeset':
PB_Cctypeset.c:(.text+0x265): undefined reference to `csymm_'
PB_Cctypeset.c:(.text+0x27b): undefined reference to `csyrk_'
PB_Cctypeset.c:(.text+0x291): undefined reference to `csyr2k_'
/home/anshu/Sim-Software/scalapack_installer/install/lib/libscalapack.a(PB_Cztypeset.o):
In function `PB_Cztypeset':
PB_Cztypeset.c:(.text+0x275): undefined reference to `zsymm_'
PB_Cztypeset.c:(.text+0x28b): undefined reference to `zsyrk_'
PB_Cztypeset.c:(.text+0x2a1): undefined reference to `zsyr2k_'
/home/anshu/Sim-Software/scalapack_installer/install/lib/libscalapack.a(cvvdotu.o):
In function `cvvdotu_':
cvvdotu.f:(.text+0x2b): undefined reference to `cdotu_'
/home/anshu/Sim-Software/scalapack_installer/install/lib/libscalapack.a(zvvdotu.o):
In function `zvvdotu_':
zvvdotu.f:(.text+0x2b): undefined reference to `zdotu_'
collect2: error: ld returned 1 exit status
/home/anshu/Sim-Software/DFTB/src/prg_dftb/GNUmakefile:44: recipe for
target 'dftb+' failed
make[1]: *** [dftb+] Error 1
make[1]: Leaving directory
'/home/anshu/Sim-Software/DFTB/src/prg_dftb/_obj_x86_64-linux-ifort-mpi'
../Makefile.objdir:69: recipe for target '_obj_x86_64-linux-ifort-mpi'
failed
make: *** [_obj_x86_64-linux-ifort-mpi] Error 2
________________________________
--
Anshu Gaur
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