[DFTB-Plus-User] MPI-DFTB+ problems in running code
Ben Hourahine
benjamin.hourahine at strath.ac.uk
Tue Apr 18 23:09:17 CEST 2017
Hi Deepti,
The problem is due to the lattice step changing the geometry to produce
atomic arrangements where the overlap matrix becomes non-positive
definite. What happens if you limit the magnitude of the lattice
changes? Add the line
MaxLatticeStep = 1E-3
to the Driver = ConjugateGradient {} block.
Regards
Ben
On 18/04/17 21:36, Deepti Verma wrote:
> Hi,
>
> I was trying to run the mpi version of dftb+ code. I noticed that the
> code runs for 02:30 to 03:00 mins and stops running.
>
> My input is:
> Geometry = GenFormat {
> <<<“Si_O_bulk.gen”
> #Contains total of 288 atoms (Si or O)
> #The structure was relaxed without SCC.
>
> }
> Driver = ConjugateGradient {
> MaxSteps = 1000
> MaxForceComponent = 1.0e-3
> LatticeOpt = Yes
> FixAngles = Yes
> AppendGeometries = Yes
> }
> Hamiltonian = DFTB {
> SCC = Yes
> SCCtolerance = 1.0e-5
> MaxSCCIterations = 10000
> MaxAngularMomentum = {
> Si = "d"
> O = "p"
> }
> Filling = Fermi {
> Temperature [Kelvin] = 0.0
> }
> SlaterKosterFiles = {
> O-O = "./O-O.skf"
> Si-Si = "./Si-Si.skf"
> Si-O = "./Si-O.skf"
> O-Si = "./O-Si.skf"
> }
> KPointsAndWeights = SupercellFolding {
> 2 0 0
> 0 1 0
> 0 0 2
> 0.5 0.0 0.5
> }
> EwaldParameter = 0.200000000000000E+000
> }
> Options = {
> }
>
> ParserOptions = {
> ParserVersion = 4
> }
>
>
>
> I get following as output:
>
> It runs perfectly till Geometry step: 3, Lattice step: 0
> and while calculating Geometry step: 4, Lattice step: 1
>
> It gives out errors
>
> MAXNEIGHBORS: 2561
> iSCC Total electronic Diff electronic SCC error
> Operation failed!
> ppotrf in scalafx_ppotrf_dcomplex
> Info: 993
> Operation failed!
> ppotrf in scalafx_ppotrf_dcomplex
> Info: 993
> . . . repeated multiple times
>
> It looks like there is something inside the code that is checking and
> when it sees an issue quits. Is anyone familiar with this part of the
> code and error?
>
> Thank You,
> Deepti
>
>
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--
Dr. B. Hourahine, SUPA, Department of Physics,
University of Strathclyde, John Anderson Building,
107 Rottenrow, Glasgow G4 0NG, UK.
+44 141 548 2325, benjamin.hourahine at strath.ac.uk
2013/14 THE Awards Entrepreneurial University of the Year
2012/13 THE Awards UK University of the Year
The University of Strathclyde is a charitable body,
registered in Scotland, number SC015263
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