[DFTB-Plus-User] (no subject)

Ben Hourahine benjamin.hourahine at strath.ac.uk
Wed Sep 10 15:25:46 CEST 2014


Dear Veerpal,

This sounds similar to

http://stackoverflow.com/questions/13301109/how-can-i-install-third-party-libraries-into-the-spcified-python-version-if-i-ha

I suspect that the numpy manual install broke your existing system
installed version. I would suggest either forcing a re-install of python
and numpy with your package manage, or alternatively updating to a more
recent LTS version of ubuntu.

Regards

Ben

On 10/09/14 12:41, veerpal kaur dhiman wrote:
> Dear sir,
> 
> I have installed numpy by using following commands:
> 
> cd numpy-1.8.1
> python setup.py build --fcompiler=gnu95
> python setup.py install
> 
> At the beginning , i was also thinking that perhaps numpy is not installed
> in my system . But today i have made it confirm by using following command :
> 
> gagan at gagan-desktop:~$ apt-cache policy python-numpy
> python-numpy:
>   Installed: 1:1.3.0-3build1
>   Candidate: 1:1.3.0-3build1
>   Version table:
>  *** 1:1.3.0-3build1 0
>         500 http://in.archive.ubuntu.com/ubuntu/ lucid/main Packages
>         100 /var/lib/dpkg/status
> gagan at gagan-desktop:~$
> 
> 
> It is clear from above that numpy is installed in my system. What is
> missing , I am unable to understand. Please give me any idea .
> 
> Thanking You,
> 
> Veerpal Kaur,
>  Physics Deptt,
> Panjab University,
> Chandigarh.
> 
> 
> 
> On Wed, Sep 10, 2014 at 4:57 PM, Ben Hourahine <
> benjamin.hourahine at strath.ac.uk> wrote:
> 
>> Dear Veerpal,
>>
>> in that case numpy is not correctly installed for your python copy. How
>> did you try to install numpy? For most LINUX systems with package
>> managers, this is the best way to get this working.
>>
>> Regards
>>
>> Ben
>>
>> On 10/09/14 05:31, veerpal kaur dhiman wrote:
>>> Dear Sir ,
>>>
>>> Same error occured when i first typed python
>>>
>>> gagan at gagan-desktop:~$ python
>>> Python 2.7.5 (default, May 22 2014, 12:49:45)
>>> [GCC 4.4.3] on linux2
>>> Type "help", "copyright", "credits" or "license" for more information.
>>>>>>
>>>
>>> and then import numpy as np
>>>
>>> gagan at gagan-desktop:~$ python
>>> Python 2.7.5 (default, May 22 2014, 12:49:45)
>>> [GCC 4.4.3] on linux2
>>> Type "help", "copyright", "credits" or "license" for more information.
>>>>>> import numpy as np
>>> Traceback (most recent call last):
>>>   File "<stdin>", line 1, in <module>
>>> ImportError: No module named numpy
>>>>>>
>>>
>>>
>>>
>>>
>>>
>>> On Tue, Sep 9, 2014 at 9:21 PM, Ben Hourahine <
>>> benjamin.hourahine at strath.ac.uk> wrote:
>>>
>>>> Dear Veerpal,
>>>>
>>>> what happens if you type
>>>>
>>>> python
>>>> import numpy as np
>>>>
>>>> ?
>>>>
>>>> Regards
>>>>
>>>> Ben
>>>>
>>>> On 09/09/14 09:14, veerpal kaur dhiman wrote:
>>>>> Dear sir,
>>>>>
>>>>> I am trying to plot density of states of Tio2 by using the input as
>> given
>>>>> in dftb+ recipes. But i am getting the error (from dptools/bin/dp_dos)
>> as
>>>>> given below :
>>>>>
>>>>> Traceback (most recent call last):
>>>>>   File "/home/gagan/dptools-0.1p3/bin/dp_dos", line 8, in <module>
>>>>>     import numpy as np
>>>>> ImportError: No module named numpy
>>>>>
>>>>>
>>>>> But when i used the "dp_dos" file by putting "#" on line "import numpy
>> as
>>>>> np" (means by removing the line "import numpy as np") then i got the
>>>> error:
>>>>>
>>>>> Traceback (most recent call last):
>>>>>   File "/home/gagan/dptools-0.1p3/bin/dp_dos", line 9, in <module>
>>>>>     from dptools.bandout import BandOut
>>>>> ImportError: No module named dptools.bandout
>>>>>
>>>>> I have installed numpy in my system . Dptools are also installed. I
>> have
>>>>> also set the PYTHONPATH variable by giving the commands  as given in
>>>> README
>>>>> file of Dptools as shown below :
>>>>>
>>>>> export PATH=$PATH:/home/gagan/dptools-0.1p3/bin
>>>>>   export
>>>>>
>>>>
>> PYTHONPATH=$PYTHONPATH:/home/gagan/dptools-0.1p3/lib/python2,7/site-packages
>>>>>
>>>>> I am trying to remove this error from two weeks but nothing happened. I
>>>> am
>>>>> new to linux and dftb+. No one in my department is using dftb+ so no
>> one
>>>>> knows the solution of this error. Please tell me any solution of this
>>>>> problem.
>>>>>
>>>>> I will be very thankful to you.
>>>>>
>>>>> Veerpal Kaur,
>>>>> Physics Department,
>>>>> Panjab University,
>>>>> Chandigarh.
>>>>>
>>>>>
>>>>>
>>>>> _______________________________________________
>>>>> DFTB-Plus-User mailing list
>>>>> DFTB-Plus-User at mailman.zfn.uni-bremen.de
>>>>>
>>>>
>> https://mailman.zfn.uni-bremen.de/cgi-bin/mailman/listinfo/dftb-plus-user
>>>>>
>>>>
>>>> --
>>>>       Dr. B. Hourahine, SUPA, Department of Physics,
>>>>     University of Strathclyde, John Anderson Building,
>>>>             107 Rottenrow, Glasgow G4 0NG, UK.
>>>>     +44 141 548 2325, benjamin.hourahine at strath.ac.uk
>>>>
>>>> 2013/4 THE Awards Entrepreneurial University of the Year
>>>>       2012/13 THE Awards UK University of the Year
>>>>
>>>>    The University of Strathclyde is a charitable body,
>>>>         registered in Scotland, number SC015263
>>>> _______________________________________________
>>>> DFTB-Plus-User mailing list
>>>> DFTB-Plus-User at mailman.zfn.uni-bremen.de
>>>>
>> https://mailman.zfn.uni-bremen.de/cgi-bin/mailman/listinfo/dftb-plus-user
>>>>
>>>
>>>
>>>
>>> _______________________________________________
>>> DFTB-Plus-User mailing list
>>> DFTB-Plus-User at mailman.zfn.uni-bremen.de
>>>
>> https://mailman.zfn.uni-bremen.de/cgi-bin/mailman/listinfo/dftb-plus-user
>>>
>>
>> --
>>       Dr. B. Hourahine, SUPA, Department of Physics,
>>     University of Strathclyde, John Anderson Building,
>>             107 Rottenrow, Glasgow G4 0NG, UK.
>>     +44 141 548 2325, benjamin.hourahine at strath.ac.uk
>>
>> 2013/4 THE Awards Entrepreneurial University of the Year
>>       2012/13 THE Awards UK University of the Year
>>
>>    The University of Strathclyde is a charitable body,
>>         registered in Scotland, number SC015263
>> _______________________________________________
>> DFTB-Plus-User mailing list
>> DFTB-Plus-User at mailman.zfn.uni-bremen.de
>> https://mailman.zfn.uni-bremen.de/cgi-bin/mailman/listinfo/dftb-plus-user
>>
> 
> 
> 
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-- 
      Dr. B. Hourahine, SUPA, Department of Physics,
    University of Strathclyde, John Anderson Building,
            107 Rottenrow, Glasgow G4 0NG, UK.
    +44 141 548 2325, benjamin.hourahine at strath.ac.uk

2013/4 THE Awards Entrepreneurial University of the Year
      2012/13 THE Awards UK University of the Year

   The University of Strathclyde is a charitable body,
        registered in Scotland, number SC015263


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