[DFTB-Plus-User] DFTB-Plus-User Digest, Vol 13, Issue 5
Axel Maeyens
axel.maeyens at ua.ac.be
Sat Jan 24 13:02:52 CET 2009
Thanks!
The things you tell me are quite what I suspected as well, but still I'm
a bit puzzled about the meaning of the second column "Sh."? Does it have
any physical meaning, or is it just an index numbering the different
l-shells used in the calculation?
l-shell populations (spin: 1)
Atom Sh. l Population
1 1 0 0.42500958
1 2 1 0.38148676
1 3 2 8.46182894
2 1 0 1.36582089
3 1 0 1.36585382
Thanks in advance,
Axel
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> 1. Re: detailed.out file (Reinaldo Pis Diez)
> 2. Re: detailed.out file (Ben Hourahine)
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> ----------------------------------------------------------------------
>
> Message: 1
> Date: Fri, 23 Jan 2009 09:18:59 -0300
> From: Reinaldo Pis Diez <reinaldo.pisdiez at gmail.com>
> Subject: Re: [DFTB-Plus-User] detailed.out file
> To: User list for DFTB+ related questions
> <dftb-plus-user at dftb-plus.info>
> Message-ID: <4979B5B3.8030006 at gmail.com>
> Content-Type: text/plain; charset=ISO-8859-1; format=flowed
>
> Hi Axel,
>
> The nickel atom is described by a valence set 3d^8 (or 9) 4s^2 (or 1)
> plus an empty 4p subshell. This is the usual "minimal basis" for
> transition metals in semiempirical methods. Thus, you have a "final"
> nickel atom with a 3d^(8.46) 4s^(0.43) 4p^(0.38) electronic configuration.
> Hope this helps.
> Regards,
>
> Reinaldo
>
> Axel Maeyens escribi?:
>
>> Dear users,
>>
>> I have problems interpreting following section of the detailed.out file
>> for NiH2 (atom1=Ni, atoms2/3=H).
>>
>> l-shell populations (spin: 1)
>> Atom Sh. l Population
>> 1 1 0 0.42500958
>> 1 2 1 0.38148676
>> 1 3 2 8.46182894
>> 2 1 0 1.36582089
>> 3 1 0 1.36585382
>>
>> There are indeed 12 valence electrons in the system (10 from Ni, 2x1
>> from H), but this output suggests that some of these are in the 1st and
>> 2nd shell for nickel!? Probably I'm interpreting the 2nd and 3th column.
>> wrongfully. Thanks in advance.
>>
>> Best wishes,
>> Axel Maeyens
>>
>>
>
>
> ------------------------------
>
> Message: 2
> Date: Fri, 23 Jan 2009 11:48:31 +0000
> From: Ben Hourahine <benjamin.hourahine at strath.ac.uk>
> Subject: Re: [DFTB-Plus-User] detailed.out file
> To: User list for DFTB+ related questions
> <dftb-plus-user at dftb-plus.info>
> Message-ID: <4979AE8F.7050501 at strath.ac.uk>
> Content-Type: text/plain; charset=iso-8859-1
>
> Hi,
>
> to add to this discussion, I made a quick attempt at repeating the
> calculation, and probably ended up with a slightly different geometry
> which looks like (using the trans-0-1 Ni and the mio-0-1 H and very
> tight convergence criteria for the SCC (E-10) and conjugate gradient (E-8)):
>
> 1 1 0.00000000 -1.87805328 0.00000000
> 2 2 0.00000000 -0.00583637 1.96150322
> 3 2 0.00000000 -0.00583637 -1.96150322
>
> this has a population which looks like
>
> Atom Sh. l Population
> 1 1 0 0.83348169
> 1 2 1 0.00959742
> 1 3 2 8.81175249
> 2 1 0 1.17258420
> 3 1 0 1.17258420
>
> So looking very much like the 3d^9 4s^1 configuration with a small
> charge transfer to the H ligands from the 4s shell.
>
> Regards
>
> Ben
>
> Reinaldo Pis Diez wrote:
>
>> Hi Axel,
>>
>> The nickel atom is described by a valence set 3d^8 (or 9) 4s^2 (or 1)
>> plus an empty 4p subshell. This is the usual "minimal basis" for
>> transition metals in semiempirical methods. Thus, you have a "final"
>> nickel atom with a 3d^(8.46) 4s^(0.43) 4p^(0.38) electronic configuration.
>> Hope this helps.
>> Regards,
>>
>> Reinaldo
>>
>> Axel Maeyens escribi?:
>>
>>> Dear users,
>>>
>>> I have problems interpreting following section of the detailed.out file
>>> for NiH2 (atom1=Ni, atoms2/3=H).
>>>
>>> l-shell populations (spin: 1)
>>> Atom Sh. l Population
>>> 1 1 0 0.42500958
>>> 1 2 1 0.38148676
>>> 1 3 2 8.46182894
>>> 2 1 0 1.36582089
>>> 3 1 0 1.36585382
>>>
>>> There are indeed 12 valence electrons in the system (10 from Ni, 2x1
>>> from H), but this output suggests that some of these are in the 1st and
>>> 2nd shell for nickel!? Probably I'm interpreting the 2nd and 3th column.
>>> wrongfully. Thanks in advance.
>>>
>>> Best wishes,
>>> Axel Maeyens
>>>
>>>
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>
>
--
_______________________________
AXEL MAEYENS
PLASMANT Research Group
Department of Chemistry,
University of Antwerp
Universiteitsplein 1,
2610 Antwerp, Belgium
office: B2.32
phone: +32-(0)3-820.23.82
fax: +32-(0)3-820.23.76
mail: axel.maeyens at ua.ac.be
_______________________________
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